micom.annotation

Helper to annotate metabolites and species.

Functions

flatten(d)	Flatten a dictionary into strings.
annotate(ids, community[, what])	Annotate a list of entities.
annotate_metabolites_from_exchanges(com)	Annotate exchange reactions by their metabolite.

Module Contents

micom.annotation.flatten(d)

Flatten a dictionary into strings.

micom.annotation.annotate(ids, community, what='reaction')

Annotate a list of entities.

micom.annotation.annotate_metabolites_from_exchanges(com)

Annotate exchange reactions by their metabolite.