micom.viz.growth
#
Visualization for growth rates.
Module Contents#
Functions#
|
Plot the taxa growth rates. |
- micom.viz.growth.plot_growth(results, filename='growth_rates_%s.html' % datetime.now().strftime('%Y%m%d'), tolerance=1e-06)[source]#
Plot the taxa growth rates.
- Parameters:
results (micom.workflows.GrowthResults) – The results returned by the grow workflow.
filename (str) – The HTML file where the visualization will be saved.
tolerance (float) – Smallest growth rate that will be considered. Everything lower will be considered not growing.
- Returns:
A MICOM visualization. Can be served with viz.serve.
- Return type: